STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF207Ring finger protein 207. (607 aa)    
Predicted Functional Partners:
nol9
Nucleolar protein 9.
      
 0.536
rps27a
Ribosomal protein S27a.
    
  0.525
gpr153
G protein-coupled receptor 153.
    
 0.501
ppil2
Peptidylprolyl isomerase like 2.
      
 0.491
zfand4
Zinc finger AN1-type containing 4.
    
  0.483
rffl
Ring finger and FYVE like domain containing E3 ubiquitin protein ligase.
      
 0.467
LOC114846116
Ubiquitin-conjugating enzyme E2 L3.
    
  0.464
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.447
gins3
GINS complex subunit 3.
      
 0.444
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.439
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.