STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114868538Tetratricopeptide repeat protein 29-like. (615 aa)    
Predicted Functional Partners:
ENSBSLP00000020520
annotation not available
   
    0.730
c8h11orf88
Chromosome 8 C11orf88 homolog.
   
    0.711
LOC114856276
Coiled-coil domain-containing protein 114-like.
   
 
 0.642
LOC114842921
Guanine nucleotide-binding protein G(o) subunit alpha-like.
   
 0.621
LOC114862655
Guanine nucleotide-binding protein G(i) subunit alpha-1.
   
 0.621
LOC114852267
Guanine nucleotide-binding protein G(o) subunit alpha-like.
   
 0.621
LOC114859443
Guanine nucleotide-binding protein G(k) subunit alpha-like.
   
 0.621
LOC114859444
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
   
 0.621
LOC114855473
Guanine nucleotide-binding protein G(i) subunit alpha-2-like.
   
 0.621
LOC114860741
Guanine nucleotide-binding protein subunit alpha-13-like.
   
 0.621
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.