Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
kdm6bLysine demethylase 6B. (2160 aa)    
Predicted Functional Partners:
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.959
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.957
atp5f1c
ATP synthase F1 subunit gamma.
  
 0.954
atp5f1d
ATP synthase F1 subunit delta.
  
 0.941
pagr1
PAXIP1 associated glutamate rich protein 1.
    
 0.939
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.931
eed
Embryonic ectoderm development.
    
 0.926
ATP5F1A
ATP synthase subunit alpha, mitochondrial-like.
  
 0.912
atp5pd
ATP synthase peripheral stalk subunit d.
   
 0.912
atp5f1a
ATP synthase F1 subunit alpha.
  
 0.912
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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