Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114862008Cytochrome P450 4V2. (517 aa)    
Predicted Functional Partners:
LOC114868725
NADPH--cytochrome P450 reductase.
 
  
 
 0.871
lss
Lanosterol synthase.
  
 0.783
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.737
LOC114854279
Cytochrome b5.
   
 
 0.704
LOC114852347
Cytochrome b5-like.
   
 
 0.704
ak7
Adenylate kinase 7.
     
 0.690
sqle
Squalene epoxidase.
  
 0.677
LOC114858770
Disco-interacting protein 2 homolog B-A.
  
 0.669
LOC114847046
Disco-interacting protein 2 homolog A-like.
  
 0.669
LOC114855889
Disco-interacting protein 2 homolog B-A-like.
  
 0.669
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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