Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857659Nuclear receptor coactivator 5-like. (418 aa)    
Predicted Functional Partners:
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
   
 0.966
nup107
Nucleoporin 107.
   
 0.954
nup133
Nucleoporin 133.
   
 0.952
nup155
Nucleoporin 155.
   
 0.951
nup205
Nucleoporin 205.
   
 0.951
nup85
Nucleoporin 85.
   
 0.950
NUP54
Nucleoporin 54.
   
 0.947
nup88
Nucleoporin 88.
   
 0.947
nup160
Nucleoporin 160.
   
 0.945
rae1
Ribonucleic acid export 1.
   
 0.945
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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