STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854265Neoverrucotoxin subunit alpha-like. (617 aa)    
Predicted Functional Partners:
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
  0.947
cdc73
Cell division cycle 73.
    
  0.928
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
  0.926
nelfe
Negative elongation factor complex member E.
    
  0.893
eloa
Elongin A.
    
  0.820
LOC114870846
elongin-A-like.
    
  0.820
LOC114848314
Flocculation protein FLO11-like.
    
  0.808
ENSBSLP00000015271
BRCA1/BRCA2-containing complex, subunit 3.
    
  0.796
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.789
LOC114866589
Serine/threonine-protein kinase Nek6-like.
    
  0.672
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.