STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nae1NEDD8 activating enzyme E1 subunit 1. (549 aa)    
Predicted Functional Partners:
LOC114856283
NEDD8-activating enzyme E1 catalytic subunit-like.
   
 0.994
UBA3
NEDD8-activating enzyme E1 catalytic subunit.
   
0.994
LOC114844574
NEDD8.
   
 0.978
LOC114867597
NEDD8-like.
   
 0.978
ube2m
Ubiquitin conjugating enzyme E2 M.
    
 0.971
ube2f
Ubiquitin conjugating enzyme E2 F (putative).
    
 0.971
mocs2
Molybdenum cofactor synthesis 2.
  
 0.920
APP
Amyloid beta precursor protein.
    
 0.919
LOC114846772
Amyloid-beta A4 protein-like.
    
 0.919
atg12
Autophagy related 12.
    
 0.897
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.