Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
alkbh5alkB homolog 5, RNA demethylase. (358 aa)    
Predicted Functional Partners:
fto
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.983
wtap
WT1 associated protein.
   
  
 0.902
ythdf2
YTH N6-methyladenosine RNA binding protein 2.
      
 0.896
alkbh1
alkB homolog 1, histone H2A dioxygenase.
      
 0.888
ythdc1
YTH domain containing 1.
      
 0.863
ythdf3
YTH N6-methyladenosine RNA binding protein 3.
      
 0.863
YTHDC2
YTH domain containing 2.
     
 0.862
rbm15
RNA binding motif protein 15.
      
 0.838
zc3h13
Zinc finger CCCH-type containing 13.
      
 0.802
mettl16
Methyltransferase like 16.
   
  
 0.787
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.