STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114856031Natural resistance-associated macrophage protein 2-like. (575 aa)    
Predicted Functional Partners:
rpl15
Ribosomal protein L15.
    
  0.801
catip
Ciliogenesis associated TTC17 interacting protein.
     
 0.791
NDFIP1
NEDD4 family-interacting protein 1-like.
   
 
 0.713
ndfip2
Nedd4 family interacting protein 2.
   
 
 0.713
LOC114869746
NEDD4 family-interacting protein 1-like.
   
 
 0.713
fech
Ferrochelatase.
  
  
 0.671
slc30a9
Solute carrier family 30 member 9.
   
 
 0.650
atp13a1
ATPase 13A1.
   
 0.608
LOC114842936
Copper-transporting ATPase 2-like.
  
 
 0.583
atp7a
ATPase copper transporting alpha.
  
 
 0.583
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.