Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114856304Transcription factor 15-like. (180 aa)    
Predicted Functional Partners:
meox1
Mesenchyme homeobox 1.
    
 
 0.557
ldb1
LIM domain binding 1.
    
 0.526
ldb2
LIM domain binding 2.
    
 0.526
LOC114842103
LIM domain-binding protein 1-A-like.
    
 0.526
ENSBSLP00000031814
annotation not available
    
 0.475
tnmd
Tenomodulin.
      
 0.461
LOC114853406
Transcription factor E2-alpha-like.
    
 0.447
LOC114845207
Transcription factor E2-alpha-like.
    
 0.447
LOC114857908
Transcription factor 12-like.
    
 0.447
tcf12
Transcription factor 12.
    
 0.447
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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