Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snapc2Small nuclear RNA activating complex polypeptide 2. (572 aa)    
Predicted Functional Partners:
zfyve9
Zinc finger FYVE-type containing 9.
      
 0.615
snapc3
Small nuclear RNA activating complex polypeptide 3.
     
  0.568
snapc1
Small nuclear RNA activating complex polypeptide 1.
     
  0.568
snapc5
Small nuclear RNA activating complex polypeptide 5.
     
  0.568
LOC114861426
snRNA-activating protein complex subunit 4-like.
      
 0.540
ENSBSLP00000021949
annotation not available
     
  0.532
LOC114860638
Cyclin-dependent kinase 5 activator 1-like.
      
 0.504
cdk5r1
Cyclin dependent kinase 5 regulatory subunit 1.
      
 0.504
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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