STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arrb2Arrestin beta 2. (463 aa)    
Predicted Functional Partners:
smo
Smoothened, frizzled class receptor.
    
 0.986
kif3a
Kinesin family member 3A.
    
 0.948
gpr161
G protein-coupled receptor 161.
   
 0.933
LOC114860625
Dual specificity mitogen-activated protein kinase kinase 4-like.
    
 0.929
map2k4
Mitogen-activated protein kinase kinase 4.
    
 0.929
gli2
GLI family zinc finger 2.
    
  0.908
gli3
GLI family zinc finger 3.
    
  0.908
LOC114845644
Zinc finger protein GLI2-like.
    
  0.908
gli1
GLI family zinc finger 1.
    
  0.908
LOC114869054
Arrestin red cell.
  
  
 
0.901
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.