STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114856019Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like. (1087 aa)    
Predicted Functional Partners:
LOC114866985
Serine/threonine-protein phosphatase 6 catalytic subunit-like.
   
 0.759
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.759
LOC114849309
E3 ubiquitin-protein ligase rnf146-like.
    
 0.757
RNF146
Ring finger protein 146.
    
 0.757
LOC114870613
Spectrin beta chain, non-erythrocytic 2-like.
   
 0.739
LOC114869139
Spectrin beta chain, non-erythrocytic 1-like.
   
 0.739
LOC114848050
Spectrin beta chain, erythrocytic-like.
   
 0.739
LOC114856124
Axin-1-like.
    
 0.728
LOC114860465
Axin-2-like.
    
 0.728
AXIN2
Axin-2-like.
    
 0.728
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.