Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
npepl1Aminopeptidase like 1. (525 aa)    
Predicted Functional Partners:
atrip
ATR interacting protein.
    
 
 0.789
prpf19
pre-mRNA processing factor 19.
    
 
 0.758
mcmbp
Minichromosome maintenance complex binding protein.
    
   0.753
stx16
Syntaxin 16.
 
 
  
 0.739
cep76
Centrosomal protein 76.
    
 0.702
ENSBSLP00000017993
annotation not available
      
 0.691
usp39
Ubiquitin specific peptidase 39.
      
 0.689
synrg
Synergin gamma.
    
 0.675
nelfcd
Negative elongation factor complex member C/D.
  
  
 0.674
rnf145
Ring finger protein 145.
      
 0.673
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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