Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC114858482Monocyte to macrophage differentiation factor 2-like. (251 aa)    
Predicted Functional Partners:
ADK
Adenosine kinase-like.
     
 0.657
spo11
SPO11 initiator of meiotic double stranded breaks.
      
 0.653
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.579
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.579
appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
 0.579
usp3
Ubiquitin specific peptidase 3.
      
 0.472
pak6
P21 (RAC1) activated kinase 6.
   
    0.465
pak5
P21 (RAC1) activated kinase 5.
   
    0.465
LOC114850147
Myosin-6-like.
   
    0.465
sdhaf1
Succinate dehydrogenase complex assembly factor 1.
     
  0.463
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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