Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
radilRap associating with DIL domain. (1167 aa)    
Predicted Functional Partners:
rap1b
RAP1B, member of RAS oncogene family.
    
 0.949
LOC114858554
Ras-related protein Rap-1A.
    
 0.949
LOC114855366
Ras-related protein Rap-1A-like.
    
 0.949
LOC114860699
Ras-associating and dilute domain-containing protein-like.
  
  
 
0.906
LOC114846327
Ras-associating and dilute domain-containing protein-like.
  
  
 
0.905
rasip1
Ras interacting protein 1.
     
 
0.900
exoc4
Exocyst complex component 4.
   
 0.681
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.637
exoc6
Exocyst complex component 6.
   
 0.610
LOC114865996
Exocyst complex component 6B-like.
   
 0.610
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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