Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nelfcdNegative elongation factor complex member C/D. (572 aa)    
Predicted Functional Partners:
nelfa
Negative elongation factor complex member A.
    
 0.999
nelfe
Negative elongation factor complex member E.
    
 0.999
nelfb
Negative elongation factor complex member B.
   
 0.999
supt4h1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.980
supt5h
SPT5 homolog, DSIF elongation factor subunit.
    
 0.972
cdk9
Cyclin dependent kinase 9.
     
 0.965
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.933
ENSBSLP00000000352
annotation not available
  
 0.932
ENSBSLP00000010661
annotation not available
  
 0.932
mccc2
methylcrotonoyl-CoA carboxylase 2.
  
 0.932
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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