STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114849154Myotubularin-related protein 1-like. (671 aa)    
Predicted Functional Partners:
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.893
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.892
pik3c2a
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha.
    
 0.876
ENSBSLP00000000884
annotation not available
    
 0.876
pik3c2b
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta.
    
 0.876
mtmr14
Myotubularin related protein 14.
     
 0.871
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.869
pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.864
LOC114843239
Phosphatidylinositide phosphatase SAC1-B.
   
 
 0.856
sacm1l
SAC1 like phosphatidylinositide phosphatase.
   
 
 0.856
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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