Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gal3st4galactose-3-O-sulfotransferase 4. (512 aa)    
Predicted Functional Partners:
LOC114845032
SLIT and NTRK-like protein 3.
      
 0.721
arsa
Arylsulfatase A.
      
 0.719
LOC114859854
ABI gene family member 3-like.
      
 0.680
inpp5d
Inositol polyphosphate-5-phosphatase D.
      
 0.661
ATE1
Arginyltransferase 1.
      
 0.655
neu4
Neuraminidase 4.
      
 0.646
TINAGL1
Tubulointerstitial nephritis antigen like 1.
      
 0.643
dtymk
Deoxythymidylate kinase.
      
 0.563
sbno2
Strawberry notch homolog 2.
      
 0.478
sbno1
Strawberry notch homolog 1.
      
 0.478
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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