Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hspa12bHeat shock protein family A (Hsp70) member 12B. (702 aa)    
Predicted Functional Partners:
hspa9
Heat shock protein family A (Hsp70) member 9.
   
 0.931
hspa5
Heat shock protein family A (Hsp70) member 5.
   
 0.915
gak
Cyclin G associated kinase.
   
 0.900
hspa13
Heat shock protein family A (Hsp70) member 13.
     
 0.887
hspa4l
Heat shock protein family A (Hsp70) member 4 like.
   
 0.885
bag3
BCL2 associated athanogene 3.
   
 0.858
hspa4
Heat shock protein family A (Hsp70) member 4.
   
 0.843
arhgef38
Rho guanine nucleotide exchange factor 38.
   
 
 0.841
dnmbp
Dynamin binding protein.
   
 
 0.841
LOC114869099
Heat shock 70 kDa protein 4-like.
   
 0.829
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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