Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858446Cytochrome P450 3A40-like. (514 aa)    
Predicted Functional Partners:
LOC114854723
Cytochrome P450 2J6-like.
  
0.958
LOC114854721
Cytochrome P450 2J6-like.
  
0.958
LOC114854720-2
Cytochrome P450 2J6-like.
  
0.958
LOC114853163
Cytochrome P450 2J5-like.
  
0.958
LOC114853161
Cytochrome P450 2J1-like.
  
0.958
LOC114853162
Cytochrome P450 2J5-like.
  
0.957
CYP19A1
Aromatase-like.
  
 
0.955
LOC114852301
Aromatase.
  
 
0.954
aox1
Aldehyde oxidase 1.
   
 
 0.946
LOC114841926
Steroid 17-alpha-hydroxylase/17,20 lyase.
  
0.942
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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