Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
naa40N(alpha)-acetyltransferase 40, NatD catalytic subunit. (240 aa)    
Predicted Functional Partners:
wdr11
WD repeat domain 11.
    
   0.974
xpot
Exportin for tRNA.
    
   0.973
naa20
N(alpha)-acetyltransferase 20, NatB catalytic subunit.
      
 0.864
xpc
XPC complex subunit, DNA damage recognition and repair factor.
    
   0.862
ssrp1
Structure specific recognition protein 1.
   
   0.846
naa30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
      
 0.812
tsn
Translin.
   
   0.786
nat10
N-acetyltransferase 10.
    
 
 0.741
bag3
BCL2 associated athanogene 3.
    
   0.726
pebp1
Phosphatidylethanolamine binding protein 1.
    
   0.718
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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