STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3TC1SH3 domain and tetratricopeptide repeats 1. (1314 aa)    
Predicted Functional Partners:
ablim2
Actin binding LIM protein family member 2.
      
 0.548
emsy
EMSY transcriptional repressor, BRCA2 interacting.
      
 0.528
LOC114864439
SH3 domain and tetratricopeptide repeat-containing protein 2-like.
      
0.499
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.434
glt8d1
Glycosyltransferase 8 domain containing 1.
      
 0.418
glt8d2
Glycosyltransferase 8 domain containing 2.
      
 0.418
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.