STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114869283Type-2 ice-structuring protein-like. (181 aa)    
Predicted Functional Partners:
LOC114866140
H-2 class I histocompatibility antigen, Q9 alpha chain-like.
    
  0.559
LOC114866527
Tenascin-like.
    
  0.525
tnn
Tenascin N.
    
  0.525
tnr
Tenascin R.
    
  0.525
LOC114845776
Tenascin-like.
    
  0.525
ENSBSLP00000056054
annotation not available
    
 0.504
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
    
  0.492
LOC114858768
Tyrosine-protein phosphatase non-receptor type 11-like.
    
  0.492
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
  0.492
COLEC12
Collectin subfamily member 12.
    
 
0.482
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.