STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
afmidArylformamidase. (321 aa)    
Predicted Functional Partners:
kynu
Kynureninase.
  
 
 0.938
tdo2
Tryptophan 2,3-dioxygenase.
  
 
 0.935
kmo
Kynurenine 3-monooxygenase.
  
 
 0.929
kyat3
Kynurenine aminotransferase 3.
  
 
 0.897
kyat1
Kynurenine aminotransferase 1.
  
 
 0.897
aadat
Aminoadipate aminotransferase.
  
 
 0.895
LOC114864912
Malate synthase-like.
  
 
 0.882
LOC114863162
Indoleamine 2,3-dioxygenase 2-like.
   
 
 0.871
fh
Fumarate hydratase.
    
 0.854
hykk
Hydroxylysine kinase.
  
 
 0.850
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.