STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ift46Intraflagellar transport 46. (328 aa)    
Predicted Functional Partners:
ttc26
Tetratricopeptide repeat domain 26.
  
 0.997
ift81
Intraflagellar transport 81.
  
 
 0.996
ift57
Intraflagellar transport 57.
  
 
 0.996
LOC114860524
Tetratricopeptide repeat protein 30A-like.
    
 0.995
ift80
Intraflagellar transport 80.
    
 0.995
cluap1
Clusterin associated protein 1.
  
 
 0.995
ift88
Intraflagellar transport 88.
    
 0.995
ift172
Intraflagellar transport 172.
   
 0.995
ift74
Intraflagellar transport 74.
    
 0.995
traf3ip1
TRAF3 interacting protein 1.
    
 0.994
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.