STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114848283Coagulation factor VII-like. (451 aa)    
Predicted Functional Partners:
LOC114844887
Tissue factor-like.
    
 0.848
serpinc1
Serpin family C member 1.
  
 0.801
ggcx
Gamma-glutamyl carboxylase.
    
 0.799
f2
Coagulation factor II, thrombin.
   
 0.796
LOC114847483
Tissue factor pathway inhibitor-like.
    
 0.762
LOC114864453
Coagulation factor VIII-like.
   
 0.695
f5
Coagulation factor V.
   
 0.695
serpina10
Serpin family A member 10.
  
 0.686
LOC114853130
Aspartyl/asparaginyl beta-hydroxylase-like.
    
 0.673
f3
Coagulation factor III, tissue factor.
    
 0.656
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.