STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854172Prohibitin-2-like. (344 aa)    
Predicted Functional Partners:
phb
Prohibitin.
  
0.998
c1qbp
Complement C1q binding protein.
   
 0.948
LOC114856240
Cytochrome b-c1 complex subunit 1, mitochondrial.
  
 0.918
pmpcb
Peptidase, mitochondrial processing beta subunit.
  
 0.918
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 0.905
tufm
Tu translation elongation factor, mitochondrial.
  
 
 0.888
LOC114852107
AFG3-like protein 1.
  
 0.880
LOC114857519
AFG3-like protein 1.
  
 0.880
afg3l2
AFG3 like matrix AAA peptidase subunit 2.
  
 0.880
micu1
Mitochondrial calcium uptake 1.
    
 0.842
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.