STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aars1alanyl-tRNA synthetase 1. (966 aa)    
Predicted Functional Partners:
cdc16
Cell division cycle 16.
   
 0.969
anapc4
Anaphase promoting complex subunit 4.
   
 0.967
anapc5
Anaphase promoting complex subunit 5.
   
 0.967
anapc1
Anaphase promoting complex subunit 1.
   
 0.966
anapc2
Anaphase promoting complex subunit 2.
    
 0.965
mysm1
Myb like, SWIRM and MPN domains 1.
   
 0.948
anapc7
Anaphase promoting complex subunit 7.
   
 0.943
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.940
ENSBSLP00000002730
Anaphase promoting complex subunit 13.
    
 0.923
aarsd1-2
alanyl-tRNA synthetase domain containing 1.
   
 
 0.923
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.