STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854297RGM domain family member B-like. (467 aa)    
Predicted Functional Partners:
dcc
DCC netrin 1 receptor.
   
 0.928
neo1
Neogenin 1.
   
 0.928
LOC114852452
Immunoglobulin superfamily DCC subclass member 4-like.
   
 0.898
LOC114867783
Bone morphogenetic protein 2-like.
    
 0.894
bmp2
Bone morphogenetic protein 2.
    
 0.894
bmp4
Bone morphogenetic protein 4.
    
 0.894
bmpr1a
Bone morphogenetic protein receptor type 1A.
    
 0.878
LOC114859157
Serine/threonine-protein kinase receptor R3-like.
    
 0.877
LOC114848128
Activin receptor type-1-like.
    
 0.877
ACVR1
Activin A receptor type 1.
    
 0.877
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.