STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114853535Importin subunit alpha-5. (578 aa)    
Predicted Functional Partners:
cse1l
Chromosome segregation 1 like.
   
 0.976
kpnb1
Karyopherin subunit beta 1.
   
 0.973
kpna3
Karyopherin subunit alpha 3.
  
0.894
ran
RAN, member RAS oncogene family.
   
 0.888
adgrd1
Adhesion G protein-coupled receptor D1.
   
 0.888
REL
REL proto-oncogene, NF-kB subunit.
    
 0.886
LOC114851349
Transcription factor p65-like.
    
 0.886
nfkb1
Nuclear factor kappa B subunit 1.
    
  0.882
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
   
 0.857
ncbp2
Nuclear cap binding protein subunit 2.
   
 
 0.848
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.