STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000003136annotation not available (170 aa)    
Predicted Functional Partners:
pdgfrb
Platelet derived growth factor receptor beta.
   
 0.981
flt3
Fms related tyrosine kinase 3.
   
 0.909
pdgfra
Platelet derived growth factor receptor alpha.
   
 0.909
LOC114862573
Platelet-derived growth factor subunit A-like.
    
0.880
LOC114860735
Platelet-derived growth factor subunit A-like.
    
0.880
flt1
Fms related tyrosine kinase 1.
   
 0.878
tie1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
    
 0.874
pdgfc
Platelet derived growth factor C.
     
 0.865
csf1r
Colony stimulating factor 1 receptor.
   
 0.861
pdgfd
Platelet derived growth factor D.
     
 0.860
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.