Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUL5 | ENSBSLP00000037601 | ENSBSLP00000030538 | ENSBSLP00000037601 | Cullin-5-like. | Ubiquitin B. | 0.782 |
CUL5 | rnf216 | ENSBSLP00000030538 | ENSBSLP00000003150 | Cullin-5-like. | Ring finger protein 216. | 0.839 |
CUL5 | rps27a | ENSBSLP00000030538 | ENSBSLP00000033441 | Cullin-5-like. | Ribosomal protein S27a. | 0.782 |
ENSBSLP00000037601 | CUL5 | ENSBSLP00000037601 | ENSBSLP00000030538 | Ubiquitin B. | Cullin-5-like. | 0.782 |
ENSBSLP00000037601 | LOC114853599 | ENSBSLP00000037601 | ENSBSLP00000020537 | Ubiquitin B. | Uncharacterized LOC114853599. | 0.967 |
ENSBSLP00000037601 | LOC114858847 | ENSBSLP00000037601 | ENSBSLP00000048666 | Ubiquitin B. | NF-kappa-B essential modulator-like. | 0.752 |
ENSBSLP00000037601 | LOC114867766 | ENSBSLP00000037601 | ENSBSLP00000033540 | Ubiquitin B. | Cullin-5. | 0.782 |
ENSBSLP00000037601 | birc6 | ENSBSLP00000037601 | ENSBSLP00000024823 | Ubiquitin B. | Baculoviral IAP repeat containing 6. | 0.913 |
ENSBSLP00000037601 | optn | ENSBSLP00000037601 | ENSBSLP00000007901 | Ubiquitin B. | Optineurin. | 0.931 |
ENSBSLP00000037601 | ripk1 | ENSBSLP00000037601 | ENSBSLP00000012496 | Ubiquitin B. | Receptor interacting serine/threonine kinase 1. | 0.846 |
ENSBSLP00000037601 | rnf216 | ENSBSLP00000037601 | ENSBSLP00000003150 | Ubiquitin B. | Ring finger protein 216. | 0.910 |
ENSBSLP00000037601 | rps27a | ENSBSLP00000037601 | ENSBSLP00000033441 | Ubiquitin B. | Ribosomal protein S27a. | 0.998 |
ENSBSLP00000037601 | uba52 | ENSBSLP00000037601 | ENSBSLP00000000745 | Ubiquitin B. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.999 |
LOC114853599 | ENSBSLP00000037601 | ENSBSLP00000020537 | ENSBSLP00000037601 | Uncharacterized LOC114853599. | Ubiquitin B. | 0.967 |
LOC114853599 | rnf216 | ENSBSLP00000020537 | ENSBSLP00000003150 | Uncharacterized LOC114853599. | Ring finger protein 216. | 0.886 |
LOC114853599 | rps27a | ENSBSLP00000020537 | ENSBSLP00000033441 | Uncharacterized LOC114853599. | Ribosomal protein S27a. | 0.954 |
LOC114853599 | uba52 | ENSBSLP00000020537 | ENSBSLP00000000745 | Uncharacterized LOC114853599. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.957 |
LOC114858847 | ENSBSLP00000037601 | ENSBSLP00000048666 | ENSBSLP00000037601 | NF-kappa-B essential modulator-like. | Ubiquitin B. | 0.752 |
LOC114858847 | birc6 | ENSBSLP00000048666 | ENSBSLP00000024823 | NF-kappa-B essential modulator-like. | Baculoviral IAP repeat containing 6. | 0.790 |
LOC114858847 | ripk1 | ENSBSLP00000048666 | ENSBSLP00000012496 | NF-kappa-B essential modulator-like. | Receptor interacting serine/threonine kinase 1. | 0.908 |
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