Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mtpnMyotrophin. (117 aa)    
Predicted Functional Partners:
capzb
Capping actin protein of muscle Z-line subunit beta.
    
 
 0.863
ENSBSLP00000000657
Twinfilin actin-binding protein 2b.
    
 0.820
LOC114857649
Twinfilin-1-like.
    
 0.820
nts
Neurotensin.
      
 0.799
LOC114855490
F-actin-capping protein subunit alpha-2-like.
   
 
 0.745
CAPZA2
Capping actin protein of muscle Z-line subunit alpha 2.
   
 
 0.745
LOC114858993
F-actin-capping protein subunit alpha-1-like.
   
 
 0.745
LOC114854279
Cytochrome b5.
    
   0.729
LOC114852347
Cytochrome b5-like.
    
   0.729
ENSBSLP00000041366
FA core complex associated protein 100.
    
   0.728
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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