STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114864589Plastin-3-like. (628 aa)    
Predicted Functional Partners:
capzb
Capping actin protein of muscle Z-line subunit beta.
    
 0.828
LOC114854321
Actin, cytoplasmic 2.
   
 
 0.676
actb
Actin beta.
   
 
 0.676
acta1
Actin alpha 1, skeletal muscle.
   
 
 0.676
LOC114866970
Beta-centractin.
   
 
 0.676
LOC114861411
Actin, cytoplasmic.
   
 
 0.676
ACTA1
Actin, alpha cardiac.
   
 
 0.676
acta2
Actin alpha 2, smooth muscle.
   
 
 0.676
ACTC1
Actin alpha cardiac muscle 1.
   
 
 0.676
arpc5
Actin related protein 2/3 complex subunit 5.
    
 
 0.631
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.