STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ostf1Osteoclast stimulating factor 1. (217 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.691
mars1
methionyl-tRNA synthetase 1.
   
 0.656
eci2
enoyl-CoA delta isomerase 2.
    
  0.644
wdr90
WD repeat domain 90.
    
 0.623
gak
Cyclin G associated kinase.
   
 0.609
pla2g4a
Phospholipase A2 group IVA.
    
 0.580
actr8
Actin related protein 8.
    
 0.565
traf7
TNF receptor associated factor 7.
    
  0.564
ubxn7
UBX domain protein 7.
    
 0.562
acp5
Acid phosphatase 5, tartrate resistant.
   
 0.560
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.