STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860876Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like. (373 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
    
 0.940
LOC114852344
Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like.
  
  
 
0.844
naga
alpha-N-acetylgalactosaminidase.
     
 0.838
LOC114843160
Beta-1,3-galactosyltransferase 1-like.
     
 0.823
B3GALT1
Beta-1,3-galactosyltransferase 1.
     
 0.823
gla
Galactosidase alpha.
     
 0.809
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.789
cenpt
Centromere protein T.
    
 0.560
radil
Rap associating with DIL domain.
    
  0.548
LOC114846327
Ras-associating and dilute domain-containing protein-like.
    
  0.548
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.