STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000003681Synaptoporin. (304 aa)    
Predicted Functional Partners:
hoga1
4-hydroxy-2-oxoglutarate aldolase 1.
   
 
  0.610
ENSBSLP00000040982
Vesicle-associated membrane protein 1.
   
 0.609
ENSBSLP00000044597
Zgc:92912.
   
 0.609
ENSBSLP00000055743
Vesicle-associated membrane protein 2.
   
 0.609
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.603
LOC114867150
Vesicle-associated membrane protein 8-like.
   
 0.496
LOC114862899
Vesicle-associated membrane protein 8-like.
   
 0.496
ENSBSLP00000022916
Vesicle-associated membrane protein 5.
   
 0.496
VAMP3
Vesicle associated membrane protein 3.
   
 0.496
vamp4
Vesicle associated membrane protein 4.
   
 0.496
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.