STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAU2MAU2 chromatid cohesion factor homolog. (620 aa)    
Predicted Functional Partners:
nipbl
NIPBL cohesin loading factor.
    
 0.927
LOC114867157
nipped-B-like protein.
    
 0.927
smc3
Structural maintenance of chromosomes 3.
    
 0.819
rbm20
RNA binding motif protein 20.
    
 0.775
smc1a
Structural maintenance of chromosomes 1A.
   
 0.760
LOC114845905
Wings apart-like protein homolog.
     
 0.758
wapl
WAPL cohesin release factor.
     
 0.758
LOC114857749
Structural maintenance of chromosomes protein 1B-like.
   
 0.750
pds5a
PDS5 cohesin associated factor A.
   
 
 0.748
pds5b
PDS5 cohesin associated factor B.
   
 
 0.748
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.