STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A42Mitochondrial coenzyme A transporter SLC25A42-like. (326 aa)    
Predicted Functional Partners:
cenpt
Centromere protein T.
   
 0.962
tk1
Thymidine kinase 1.
  
 
 0.946
tyms
Thymidylate synthetase.
  
 0.938
ENSBSLP00000048337
annotation not available
  
 0.911
dctd
dCMP deaminase.
  
 0.906
dtymk
Deoxythymidylate kinase.
  
 
 0.904
itpa
Inosine triphosphatase.
  
 0.904
cenpn
Centromere protein N.
   
 0.899
rpl18
Ribosomal protein L18.
 
 
    0.893
cenpk
Centromere protein K.
   
 0.891
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.