STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114853437Ras-related protein Rab-11B. (244 aa)    
Predicted Functional Partners:
LOC114862628
Rab11 family-interacting protein 1-like.
  
 0.935
rab11fip2
RAB11 family interacting protein 2.
  
 0.935
LOC114866762
Golgin subfamily A member 6-like protein 22.
  
 0.935
LOC114848546
Rab11 family-interacting protein 5-like.
  
 0.935
rab3il1
RAB3A interacting protein like 1.
    
 0.902
rab3ip
RAB3A interacting protein.
    
 0.902
LOC114852798
Intersectin-2-like.
    
 0.892
itsn2
Intersectin 2.
    
 0.892
LOC114860433
Rab11 family-interacting protein 4A-like.
    
 0.860
rab11fip4
RAB11 family interacting protein 4.
    
 0.860
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.