STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860765Integrin alpha-3-like. (1071 aa)    
Predicted Functional Partners:
lamb1
Laminin subunit beta 1.
    
 0.928
itgb4
Integrin subunit beta 4.
   
 0.925
itgb6
Integrin subunit beta 6.
   
 0.916
itgb8
Integrin subunit beta 8.
    
 0.905
itgb5
Integrin subunit beta 5.
   
 0.905
itgb1
Integrin subunit beta 1.
   
 0.904
LOC114847462
Integrin beta-2-like.
   
 0.903
LAMA2
Laminin subunit alpha 2.
    
 0.888
LAMC2
Laminin subunit gamma-2-like.
   
 0.884
lama4
Laminin subunit alpha 4.
    
 0.864
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.