STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861055Forkhead box protein J1-A-like. (474 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.755
sgk3
Serum/glucocorticoid regulated kinase family member 3.
    
 0.656
c15h6orf118
Chromosome 15 C6orf118 homolog.
   
    0.627
rfx2
Regulatory factor X2.
    
 
 0.579
LOC114862140
Transmembrane emp24 domain-containing protein 7-like.
    
  0.562
LOC114845051
TIR domain-containing adapter molecule 1-like.
    
  0.562
sirt1
Sirtuin 1.
    
 0.560
SIRT5
Sirtuin 5.
    
 0.558
rfx3
Regulatory factor X3.
    
 
 0.545
sting1
Stimulator of interferon response cGAMP interactor 1.
    
  0.540
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.