STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114862033Zinc finger MIZ domain-containing protein 2-like. (947 aa)    
Predicted Functional Partners:
LOC114860313
SUMO-conjugating enzyme UBC9-like.
    
 0.825
kctd2
Potassium channel tetramerization domain containing 2.
    
 0.825
ube2i
Ubiquitin conjugating enzyme E2 I.
    
 0.825
sumo1
Small ubiquitin like modifier 1.
    
 0.798
ENSBSLP00000024732
annotation not available
   
 0.777
sumo2
Small ubiquitin like modifier 2.
    
 0.773
LOC114861721
Small ubiquitin-related modifier 2-like.
    
 0.773
SUMO3
Small ubiquitin-related modifier 3.
    
 0.773
LOC114846839
Small ubiquitin-related modifier 3.
    
 0.773
bard1
BRCA1 associated RING domain 1.
    
 0.744
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.