STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000004387annotation not available (287 aa)    
Predicted Functional Partners:
LOC114862709
Heparan sulfate glucosamine 3-O-sulfotransferase 1-like.
  
  
 
0.842
HS3ST1
Heparan sulfate-glucosamine 3-sulfotransferase 1.
  
  
 
0.841
LOC114851904
Glypican-6-like.
     
 0.532
gpc2
Glypican 2.
     
 0.532
LOC114864095
Glypican-4-like.
     
 0.532
LOC114847192
Glypican-6-like.
     
 0.532
agrn
Agrin.
     
 0.491
SDC3
Syndecan 3.
     
 0.482
LOC114844261
Glypican-1-like.
     
 0.443
LOC114854777
Glypican-1-like.
     
 0.443
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.