STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114868522Caspase recruitment domain-containing protein 18-like. (94 aa)    
Predicted Functional Partners:
LOC114843270
Apoptosis-associated speck-like protein containing a CARD.
   
 0.964
LOC114863211
Interleukin-1 beta-like.
   
 0.932
apaf1
Apoptotic peptidase activating factor 1.
    
 0.921
LOC114844036
Caspase-8-like.
   
 0.880
LOC114847689
Caspase-8-like.
   
 0.880
LOC114844037
Caspase-3-like.
   
 0.877
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.862
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.862
appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 0.862
il1rn
Interleukin 1 receptor antagonist.
   
 0.839
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.