STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114853276Putative ferric-chelate reductase 1. (620 aa)    
Predicted Functional Partners:
LOC114857384
39S ribosomal protein L23, mitochondrial-like.
   
 
 0.805
mrpl46
Mitochondrial ribosomal protein L46.
   
   0.801
mrpl3
Mitochondrial ribosomal protein L3.
   
   0.790
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.763
mrpl16
Mitochondrial ribosomal protein L16.
   
 
 0.756
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.756
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.754
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.753
mrps15
Mitochondrial ribosomal protein S15.
   
   0.753
mrps35
Mitochondrial ribosomal protein S35.
   
   0.752
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.