STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fanceFA complementation group E. (503 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
fancm
FA complementation group M.
    
 0.999
rpl18a
Ribosomal protein L18a.
  
 0.996
rps23
Ribosomal protein S23.
  
 0.996
rpl31
Ribosomal protein L31.
  
 0.996
rpl8
Ribosomal protein L8.
  
 0.996
rpl11
Ribosomal protein L11.
  
 0.996
RPL7A
Ribosomal protein L7a.
  
 0.995
rpl23a
Ribosomal protein L23a.
  
 0.995
rpl17
Ribosomal protein L17.
  
 0.995
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.