STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coro1cCoronin 1C. (1180 aa)    
Predicted Functional Partners:
fpgs
Folylpolyglutamate synthase.
    
 0.739
ctnnb1
Catenin beta 1.
  
 0.728
mocs1
Molybdenum cofactor synthesis 1.
    
 0.720
ephx2
Epoxide hydrolase 2.
    
 0.719
tyms
Thymidylate synthetase.
    
 0.703
rfk
Riboflavin kinase.
  
 
 0.697
LOC114857630
Dihydrofolate reductase-like.
    
 0.692
dhfr
Dihydrofolate reductase.
    
 0.692
hdhd3
Haloacid dehalogenase like hydrolase domain containing 3.
    
 0.655
nanp
N-acetylneuraminic acid phosphatase.
    
 0.655
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.