STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865387Apolipoprotein Eb-like. (232 aa)    
Predicted Functional Partners:
ENSBSLP00000050969
annotation not available
   
 
 0.950
LOC114849542
Apolipoprotein B-100-like.
   
 0.943
cetp
Cholesteryl ester transfer protein.
   
 0.886
lpl
Lipoprotein lipase.
     
 0.880
ENSBSLP00000047249
annotation not available
   
 0.879
LOC114857615
Phosphatidylcholine-sterol acyltransferase-like.
    
 0.877
LOC114842471
Serum paraoxonase/arylesterase 2-like.
   
 
 0.874
LOC114843326
Apolipoprotein A-I-like.
   
 0.855
LOC114843327
Apolipoprotein A-I-like.
   
 0.855
pla2g7
Phospholipase A2 group VII.
     
 0.835
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.